CDS

Accession Number TCMCG057C16300
gbkey CDS
Protein Id XP_018485280.1
Location complement(join(7777361..7777426,7777552..7777652,7777734..7777891,7777972..7778034,7778132..7778271,7778633..7778726,7778803..7779005))
Gene LOC108855861
GeneID 108855861
Organism Raphanus sativus

Protein

Length 274aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018629778.1
Definition PREDICTED: syntaxin-23 isoform X2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category U
Description Belongs to the syntaxin family
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
KEGG_ko ko:K08488        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04130        [VIEW IN KEGG]
ko04145        [VIEW IN KEGG]
map04130        [VIEW IN KEGG]
map04145        [VIEW IN KEGG]
GOs GO:0000149        [VIEW IN EMBL-EBI]
GO:0000325        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005774        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006906        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009606        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009629        [VIEW IN EMBL-EBI]
GO:0009630        [VIEW IN EMBL-EBI]
GO:0009657        [VIEW IN EMBL-EBI]
GO:0009660        [VIEW IN EMBL-EBI]
GO:0009705        [VIEW IN EMBL-EBI]
GO:0009959        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010118        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016021        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016050        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0022406        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031201        [VIEW IN EMBL-EBI]
GO:0031224        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044437        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048278        [VIEW IN EMBL-EBI]
GO:0048284        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051640        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0061024        [VIEW IN EMBL-EBI]
GO:0061025        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090174        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]
GO:0140056        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGTTTTCAGGATTTAGAGGCGGGAAGAGGAGGGAGACCGTTAGCTTCTTCGAGTAGTAACATCAATGGAGGAGGGAGACAAGACACGACGCAAGCCGTGGCTTCCGGTGTGTTCCAGATCAACACAGCCGTCTCTAGCTTCCACCGTCTGGTCAACACTCTCGGTACTCCCAAAGACACCCCGGAGCTCCGAGATAAGCTGCACAAGACAAGACTACATATCGGAGAGTTAGTGAAAGACACGTCTGTTAAACTTAGAGAAGCTAGTGAAACTGATCATCAAAGAGGCGTAGATCAAAGGAAGAAGATTGTGGATGCTAAGCTTGCAAAGGACTTTCAGTCTGTATTGAAAGAGTTTCAAAAGGCGCAGCGTCTCGCTGCTGAAAGAGAAACTGTCTATGCTCCTCTTTTCACCAGTCCTTCTCCTCCATCTAGTGAGATAGATGTGAGTGGAGATAAGCATTCAGAGCAGCGTGCGCTTCTTGTGGAATCGAAAAGACAAGAACTTGTACTGCTGGACAATGAGATTGTATTTAATGAAGCTATCATCGAGGAACGAGAGCAAGGGATACAAGAGATCCAGCAGCAAATTGGTGAGGTGCACGAGATCTTCAAAGACTTGGCTGTCCTGGTACATGATCAAGGCACCATGATCGATGATATTAGTACTCACATCGATAACTCCCACGCTGCAACAGCACAAGGAAGATCTCATCTCGCAAAAGCTTCGAAGACACAAAGATCGAGTTCAACTCTGATGTGCTTGCTCATGGTGATTTTTGGAATCGTACTCCTGATTGTTATCATAGTGCTGGCGATTTGA
Protein:  
MSFQDLEAGRGGRPLASSSSNINGGGRQDTTQAVASGVFQINTAVSSFHRLVNTLGTPKDTPELRDKLHKTRLHIGELVKDTSVKLREASETDHQRGVDQRKKIVDAKLAKDFQSVLKEFQKAQRLAAERETVYAPLFTSPSPPSSEIDVSGDKHSEQRALLVESKRQELVLLDNEIVFNEAIIEEREQGIQEIQQQIGEVHEIFKDLAVLVHDQGTMIDDISTHIDNSHAATAQGRSHLAKASKTQRSSSTLMCLLMVIFGIVLLIVIIVLAI